The Brain2Mesh toolbox provides a streamlined matlab function to convert a segmented MRI scan into a high-quality multi-layered tetrahedral brain/full head mesh.
The Brain2Mesh toolbox is extensively dependent on the Iso2Mesh toolbox (http://iso2mesh.sf.net) with additional dependency on MATLAB Image-Processing toolbox (imfill, ordfilt2) and 3rd party open-source toolboxes: intriangulation.m (by Adam Aitkenhead and Johannes Korsawe) and max_filter.m.
Please download the latest code from our Github repository.
Please download the pre-generated brain atlas mesh library from our Github repository.
Currently, it contains the following meshes:
BrainMeshLibrary ├── BrainWeb │ └── mat │ ├── Brainweb_Subject04.mat │ ├── Brainweb_Subject05.mat │ ├── Brainweb_Subject06.mat │ ├── Brainweb_Subject18.mat │ ├── Brainweb_Subject20.mat │ ├── Brainweb_Subject38.mat │ ├── Brainweb_Subject41.mat │ ├── Brainweb_Subject42.mat │ ├── Brainweb_Subject43.mat │ ├── Brainweb_Subject44.mat │ ├── Brainweb_Subject45.mat │ ├── Brainweb_Subject46.mat │ ├── Brainweb_Subject47.mat │ ├── Brainweb_Subject48.mat │ ├── Brainweb_Subject49.mat │ ├── Brainweb_Subject50.mat │ ├── Brainweb_Subject51.mat │ ├── Brainweb_Subject52.mat │ ├── Brainweb_Subject53.mat │ └── Brainweb_Subject54.mat ├── Neurodevelopmental │ └── mat │ ├── 12-0Years3T.mat │ ├── 14-0Years3T.mat │ ├── 15-0Months.mat │ ├── 16-0Years3T.mat │ ├── 18-0Years3T.mat │ ├── 18-5Years3T.mat │ ├── 19-0Years3T.mat │ ├── 19-5Years3T.mat │ ├── 20-24Years3T.mat │ ├── 2-0Years.mat │ ├── 25-29Years3T.mat │ ├── 2-5Years.mat │ ├── 30-34Years3T.mat │ ├── 3-0Months.mat │ ├── 3-0Years.mat │ ├── 35-39Years.mat │ ├── 40-44Years.mat │ ├── 45-49Years.mat │ ├── 4-5Months.mat │ ├── 50-54Years.mat │ ├── 5-0Years.mat │ ├── 55-59Years.mat │ ├── 60-64Years.mat │ ├── 6-0Months.mat │ ├── 65-69Years.mat │ ├── 70-74Years.mat │ ├── 75-79Years.mat │ ├── 7-5Months.mat │ ├── 80-84Years.mat │ ├── 8-0Years3T.mat │ ├── 8-5Years3T.mat │ ├── 9-0Months.mat │ └── 9-5Years3T.mat └── README.md